Source: r-bioc-dada2
Standards-Version: 4.7.3
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders:
 Steffen Moeller <moeller@debian.org>,
Section: gnu-r
Testsuite: autopkgtest-pkg-r
Build-Depends:
 debhelper-compat (= 13),
 dh-r,
 r-base-dev,
 r-cran-rcpp,
 r-bioc-biostrings,
 r-cran-ggplot2,
 r-cran-reshape2,
 r-bioc-shortread,
 r-cran-rcppparallel,
 r-bioc-iranges,
 r-bioc-xvector,
 r-bioc-biocgenerics,
 architecture-is-64-bit,
 architecture-is-little-endian,
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-dada2
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-dada2.git
Homepage: https://bioconductor.org/packages/dada2/
Rules-Requires-Root: no

Package: r-bioc-dada2
Architecture: any-amd64
Depends:
 ${R:Depends},
 ${shlibs:Depends},
 ${misc:Depends},
Recommends:
 ${R:Recommends},
Suggests:
 ${R:Suggests},
Description: sample inference from amplicon sequencing data
 The dada2 package contributes to software workflows to interpret
 sequencing data from microbiota - the relative abundance of
 bacterial and/or yeast, typically measured in the gut.
 It infers exact amplicon sequence
 variants (ASVs) from high-throughput amplicon sequencing data,
 replacing the coarser and less accurate OTU clustering approach.
 The dada2 pipeline takes as input demultiplexed fastq files, and
 outputs the sequence variants and their sample-wise abundances
 after removing substitution and chimera errors. Taxonomic
 classification is available via a native implementation of the RDP
 naive Bayesian classifier, and species-level assignment to 16S
 rRNA gene fragments by exact matching.
